Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_97412179_97418348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97412179 - 97418348

Intron Length:

6170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATAAAG

5'SS Class:

major

3'SS Sequence:

TAACTTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTTATGTAACT

Flanking Amino Acid:

SSSASADLLAGFGGSFIAPS

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

66.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.9

0.45

1.1

67.9

42.1

Minor 5ss

-1.9

2.9

37.5

41.1

Minor BPS

56.7

0.29

2.2

80.33

41.9

Associated Gene:

Gene:

SNAP91

Ensembl Gene ID:

ENSAPLG00000008991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021218

97400765 - 97468697

67933

ENSAPLT00000009450

97401850 - 97468697

66848