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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97419448_97419878_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
97419448 - 97419878

Intron Length:
431

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGAGTGCT

5'SS Class:
strong_major

3'SS Sequence:
GTGCTTACTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTAAA

U12 Branch Point Sequence:
TGATACTAAATA

Flanking Amino Acid:
ESSLTADLLSVDAFAAPSPL

Intron Amino Acid Position:
423

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.4
0.81
0.9
76.7
31.8

Major BPS
77.5
0.68
0.8
76.2
24.6

Major PPT
73.3
0.52
1
66.7
39.3

Minor 5ss
30
-2.3
3.2
38.4
40.8

Minor BPS
54.4
0.13
1.8
66.12
40.2

Associated Gene:

Gene:
SNAP91

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

97400765 - 97468697
67933

97401850 - 97468697
66848