Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_97419951_97420057_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97419951 - 97420057

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAGA

5'SS Class:

strong_major

3'SS Sequence:

TCATTTCTGGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCTTTCATT

Flanking Amino Acid:

ATPSIDLFGTDAFSSPPHGA

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

64.3

0.32

1.2

67.8

37.8

Minor 5ss

-2.2

3.2

45.7

Minor BPS

73.9

0.83

1.6

91.31

32.6

Associated Gene:

Gene:

SNAP91

Ensembl Gene ID:

ENSAPLG00000008991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021218

97400765 - 97468697

67933

ENSAPLT00000009450

97401850 - 97468697

66848