Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_97420136_97432192_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97420136 - 97432192

Intron Length:

12057

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGAAA

5'SS Class:

major

3'SS Sequence:

TTCTTGGTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

AATGAGTTAAAG

Flanking Amino Acid:

AAPAGATSWGDLFESVPDAP

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

68.2

38.4

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

74.1

0.54

0.9

72.7

37.5

Minor 5ss

29.5

-2.3

3.4

38.5

46.8

Minor BPS

42.7

-0.6

2.3

49.36

43.8

Associated Gene:

Gene:

SNAP91

Ensembl Gene ID:

ENSAPLG00000008991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009450

97401850 - 97468697

66848