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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97427000_97427149_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
97427000 - 97427149

Intron Length:
150

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGAGTAGT

5'SS Class:
strong_major

3'SS Sequence:
TGGTTGCATATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTGAT

U12 Branch Point Sequence:
TCTTCGTTATGT

Flanking Amino Acid:
ATSWGDLLGEDNLAALSGVT

Intron Amino Acid Position:
378

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.3
0.79
0.9
77.8
38.7

Major BPS
78.6
0.71
1.2
71.4
45.1

Major PPT
64.9
0.34
1
58.5
42.3

Minor 5ss
31.6
-2.1
2.7
34.1
41.4

Minor BPS
48.7
-0
2.5
75.16
47.6

Associated Gene:

Gene:
SNAP91

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

97400765 - 97468697
67933