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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97441582_97443042_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
97441582 - 97443042

Intron Length:
1461

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGTAAA

5'SS Class:
strong_major

3'SS Sequence:
ATTATTTCTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAATTAT

U12 Branch Point Sequence:
GATACCTTAACT

Flanking Amino Acid:
CYNDGVINLLEKFFEMKKGQ

Intron Amino Acid Position:
220

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.9
1.13
0.6
92.3
16.1

Major BPS
68.1
0.45
1
58.1
38.5

Major PPT
78.5
0.64
0.8
70.8
40.3

Minor 5ss
35
-1.7
2.7
41.8
44.8

Minor BPS
80.3
1.03
1.2
87.49
37

Associated Gene:

Gene:
SNAP91

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

97400765 - 97468697
67933

97401850 - 97468697
66848