Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_97444503_97446564_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97444503 - 97446564

Intron Length:

2062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GGCTTCTGATCT

Flanking Amino Acid:

MAFDFARVKKGADGVMRTMA

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.1

38.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

85.5

0.8

0.7

80.4

24.9

Minor 5ss

38.3

-1.3

2.8

40.3

45.6

Minor BPS

49.7

0.06

1.7

66.04

44.2

Associated Gene:

Gene:

SNAP91

Ensembl Gene ID:

ENSAPLG00000008991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021218

97400765 - 97468697

67933

ENSAPLT00000009450

97401850 - 97468697

66848