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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97449380_97468543_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
97449380 - 97468543

Intron Length:
19164

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGCATC

5'SS Class:
major

3'SS Sequence:
GTCTCTCCTACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACCTAAA

U12 Branch Point Sequence:
AGCACCTAAAAC

Flanking Amino Acid:
VMGPKKKHLDYLIQATNETN

Intron Amino Acid Position:
44

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.5
0.48
1.1
69.5
41.3

Major BPS
63.9
0.35
1
63.9
30.3

Major PPT
79.5
0.66
0.8
72.7
32.2

Minor 5ss
46.9
-0.3
2.9
71.1
38.9

Minor BPS
48.4
-0.1
1.8
55.73
42

Associated Gene:

Gene:
SNAP91

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

97400765 - 97468697
67933

97401850 - 97468697
66848