Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_97546296_97546398_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

97546296 - 97546398

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGTA

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTATGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTTAATTAAAA

Flanking Amino Acid:

ITIVVYTKQKDMNAELVIVD

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

83.9

27.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

0.18

1.2

60.1

39.6

Minor 5ss

35.6

-1.6

3.4

47.2

Minor BPS

58.3

0.26

1.9

74.02

36.5

Associated Gene:

Gene:

CYB5R4

Ensembl Gene ID:

ENSAPLG00000011840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012346

97527648 - 97562978

35331

ENSAPLT00000044096

97527988 - 97562978

34991