Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_97553759_97554356_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97553759 - 97554356

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGACTATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TCTCTTTTGACT

Flanking Amino Acid:

FTQALDRLQIGDYISVSSPE

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

84.9

26.2

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

0.5

66.3

39.6

Minor 5ss

-1.8

2.8

39.2

40.5

Minor BPS

68.2

0.65

1.2

79.65

36.7

Associated Gene:

Gene:

CYB5R4

Ensembl Gene ID:

ENSAPLG00000011840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012346

97527648 - 97562978

35331

ENSAPLT00000044096

97527988 - 97562978

34991