Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_97593096_97596737_F

Intron Information:

Intron Rank:

128504

Intron Class:

major

Intron Phase:

Intron Coordinates:

97593096 - 97596737

Intron Length:

3642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TCTATTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TATTGCTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.1

63.8

40.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

0.74

0.8

77.5

35.3

Minor 5ss

36.1

-1.6

3.6

55.2

43.1

Minor BPS

67.8

0.64

1.8

83.82

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019215

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038138

97592698 - 97597987

5290

ENSAPLT00000022738

97592823 - 97597987

5165