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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97601178_97601452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

97601178 - 97601452

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

CATTCTGTACTA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

76.8

0.67

0.9

75.9

Major PPT

79.2

0.66

0.9

73.4

36.2

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

46.4

-0.2

2.2

59.37

41.5

Associated Gene:

Gene:

MRAP2

Ensembl Gene ID:

ENSAPLG00000011519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011999

97600210 - 97611943

11734