Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_97620190_97621089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97620190 - 97621089

Intron Length:

900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATATGTA

5'SS Class:

major

3'SS Sequence:

TCTGAAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

GTTATCTGAAAT

Flanking Amino Acid:

QMREELLQKEVAKLLEELRE

Intron Amino Acid Position:

1293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

76.5

32.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

0.41

63.8

41.5

Minor 5ss

41.7

-0.9

3.2

57.6

47.1

Minor BPS

58.4

0.34

1.6

75.93

39.8

Associated Gene:

Gene:

CEP162

Ensembl Gene ID:

ENSAPLG00000011565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039731

97617827 - 97658032

40206

ENSAPLT00000022847

97617827 - 97646229

28403

ENSAPLT00000012114

97617827 - 97658032

40206

ENSAPLT00000043852

97617827 - 97658032

40206