Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_97626546_97627712_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97626546 - 97627712

Intron Length:

1167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCCAT

5'SS Class:

major

3'SS Sequence:

TTTCTGTTGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTCTCTTTAACT

Flanking Amino Acid:

AKRIQDLERQIREMEGILKR

Intron Amino Acid Position:

915

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

71.6

40.1

Major BPS

78.2

0.7

77.9

32.1

Major PPT

75.1

0.57

73.1

37.2

Minor 5ss

41.2

-1

3.2

56.8

41.8

Minor BPS

87.8

1.26

0.9

95.57

31.2

Associated Gene:

Gene:

CEP162

Ensembl Gene ID:

ENSAPLG00000011565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022847

97617827 - 97646229

28403

ENSAPLT00000012114

97617827 - 97658032

40206

ENSAPLT00000043852

97617827 - 97658032

40206

ENSAPLT00000039731

97617827 - 97658032

40206