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Intron Name: Anas_platyrhynchos_platyrhynchos_3_97633946_97635747_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

97633946 - 97635747

Intron Length:

1802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTGATGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTGCCTGATG

Flanking Amino Acid:

RSPSDRAKSKEVLFATRVIR

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

74.6

41.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.14

1.1

56.1

38.2

Minor 5ss

37.9

-1.4

50.1

46.1

Minor BPS

47.3

-0.3

2.1

58.85

43.5

Associated Gene:

Gene:

CEP162

Ensembl Gene ID:

ENSAPLG00000011565

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022847

97617827 - 97646229

28403

ENSAPLT00000012114

97617827 - 97658032

40206

ENSAPLT00000043852

97617827 - 97658032

40206

ENSAPLT00000039731

97617827 - 97658032

40206