Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_97835915_97864464_R

Intron Information:

Intron Rank:

152089

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

97835915 - 97864464

Intron Length:

28550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ACTTGGGTTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

GTATTTATAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

57.9

0.18

1.2

55.3

43.4

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

62.5

0.47

1.6

78.23

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034375

97835540 - 97864741

29202