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Intron Name: Anas_platyrhynchos_platyrhynchos_3_9804294_9805947_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9804294 - 9805947

Intron Length:

1654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTGTGCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCGTGCTGACCG

Flanking Amino Acid:

MAQRYDELPHYGGM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

38.1

Major BPS

66.3

0.4

1.1

41.8

Major PPT

66.3

0.37

0.9

58.7

38.3

Minor 5ss

40.2

-1.1

3.1

51.4

45.2

Minor BPS

-0.7

2.1

43.2

48.2

Associated Gene:

Gene:

MEIS1

Ensembl Gene ID:

ENSAPLG00000009141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043259

9702317 - 9806518

104202

ENSAPLT00000018791

9702110 - 9806518

104409