Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_98207185_98207423_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

98207185 - 98207423

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

AAATTTTCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

TTTTTCCAAATT

Flanking Amino Acid:

DPFIVEEIQRIAVGPYEDVV

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

72.6

0.51

0.9

67.2

39.2

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

59.2

0.37

83.92

37.4

Associated Gene:

Gene:

SNX14

Ensembl Gene ID:

ENSAPLG00000010097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032445

98183234 - 98233089

49856

ENSAPLT00000010653

98183234 - 98233089

49856