Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_98211690_98212372_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

98211690 - 98212372

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGACTT

5'SS Class:

major

3'SS Sequence:

TGTTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATTTCTTTAATA

Flanking Amino Acid:

LPSMDFLADPDTVNHLLLIF

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

68.8

41.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

89.8

0.89

0.7

84.9

29.9

Minor 5ss

40.8

-1

3.4

67.4

Minor BPS

83.5

1.05

0.9

85.51

26.7

Associated Gene:

Gene:

SNX14

Ensembl Gene ID:

ENSAPLG00000010097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032445

98183234 - 98233089

49856

ENSAPLT00000010653

98183234 - 98233089

49856