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Intron Name: Anas_platyrhynchos_platyrhynchos_3_98212449_98212747_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
98212449 - 98212747

Intron Length:
299

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATAAAAA

5'SS Class:
major

3'SS Sequence:
TTTTTCTTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATGTAAT

U12 Branch Point Sequence:
TGTAATCTAGTA

Flanking Amino Acid:
YILPPKSTECRSLALLIREI

Intron Amino Acid Position:
264

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1
72
32.5

Major BPS
75.6
0.64
1.1
75.7
36.5

Major PPT
97.2
1.06
0.5
96.4
12.2

Minor 5ss
38.2
-1.3
2.9
48.3
47.4

Minor BPS
42.5
-0.5
1.9
54.76
37.8

Associated Gene:

Gene:
SNX14

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

98183234 - 98233089
49856

98183234 - 98233089
49856