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Intron Name: Anas_platyrhynchos_platyrhynchos_3_98250152_98252229_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

98250152 - 98252229

Intron Length:

2078

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTACGTGGT

5'SS Class:

major

3'SS Sequence:

GTTACCTGGCTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

ATTTATCTAATT

Flanking Amino Acid:

GGAQQQRGRGQGKGVEAGPD

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

67.3

44.3

Major BPS

85.7

0.89

0.8

22.2

Major PPT

57.2

0.16

1.1

50.9

43.7

Minor 5ss

32.9

-2

3.4

40.6

45.6

Minor BPS

58.6

0.35

1.8

80.1

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009918

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032363

98250060 - 98271553

21494

ENSAPLT00000010353

98250110 - 98353553

103444