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Intron Name: Anas_platyrhynchos_platyrhynchos_3_98662547_98691275_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
98662547 - 98691275

Intron Length:
28729

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCAGCGGG

5'SS Class:
major

3'SS Sequence:
TCTTCCTAAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGTAAT

U12 Branch Point Sequence:
TGTTCCTGAATT

Flanking Amino Acid:
ASEYCQQLCQTLLEYAEKWK

Intron Amino Acid Position:
54

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.6
0.51
1.3
58
47.1

Major BPS
72.1
0.55
1.2
73.3
39.1

Major PPT
73.7
0.53
0.9
70.1
34.2

Minor 5ss
31.2
-2.2
3.2
38.7
46.4

Minor BPS
78.2
0.96
1.3
90.07
33.6

Associated Gene:

Gene:
ZNF292

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

98662388 - 98695333
32946

98662388 - 98718412
56025

98662388 - 98718412
56025