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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_98691431_98692521_F

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
98691431 - 98692521
Intron Length:
1091

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACT|GTGAGTATT
5'SS Class:
major
3'SS Sequence:
ATTTGCATTCCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTAAA
U12 Branch Point Sequence:
GATGCCTCAAAT
Flanking Amino Acid:
NVAFVLERLALSCIELLLCL
Intron Amino Acid Position:
105

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.4
0.58
1
80.3
34.1
Major BPS
81.6
0.78
0.8
82
24.9
Major PPT
77.3
0.61
0.9
67.3
43.1
Minor 5ss
39.1
-1.2
3.1
61.3
43
Minor BPS
55.6
0.25
1.8
72.08
43.9

Associated Gene:

Gene:
ZNF292
Ensembl Gene ID:
ENSAPLG00000030037
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000026353
98662388 - 98695333
32946
ENSAPLT00000023439
98662388 - 98718412
56025
ENSAPLT00000034314
98662388 - 98718412
56025