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Intron Name: Anas_platyrhynchos_platyrhynchos_3_98694786_98704470_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
98694786 - 98704470

Intron Length:
9685

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAAATTT

5'SS Class:
strong_major

3'SS Sequence:
TTTTTCTTTGAAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATGTAAC

U12 Branch Point Sequence:
TTTTCTTTGAAG

Flanking Amino Acid:
LSQEQLDPDKVNEFLVFEGP

Intron Amino Acid Position:
177

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.8
0.82
0.9
84
27.7

Major BPS
65.7
0.39
1.2
67.4
36.7

Major PPT
84.7
0.78
0.9
87.1
23.9

Minor 5ss
43.2
-0.7
3.3
64.8
46.5

Minor BPS
70.8
0.51
1.4
75.57
36.2

Associated Gene:

Gene:
ZNF292

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

98662388 - 98718412
56025

98662388 - 98718412
56025