About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_98707683_98709315_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
98707683 - 98709315

Intron Length:
1633

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGAGTTTG

5'SS Class:
strong_major

3'SS Sequence:
TCTCTTGTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGAAAT

U12 Branch Point Sequence:
TGGCCTTGAAAT

Flanking Amino Acid:
QLQQGEMYCAWELTLFWSKL

Intron Amino Acid Position:
290

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.6
0.82
0.9
76.6
34.9

Major BPS
67.2
0.43
1.2
73.3
39.1

Major PPT
79.8
0.67
0.8
72.8
37.5

Minor 5ss
38.5
-1.3
2.9
46.1
43.6

Minor BPS
53.3
0.18
1.6
68.73
41.6

Associated Gene:

Gene:
ZNF292

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

98662388 - 98718412
56025

98662388 - 98718412
56025