Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_98731352_98735420_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

98731352 - 98735420

Intron Length:

4069

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAGTCGCT

5'SS Class:

weak_major

3'SS Sequence:

CAATGTCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TCAACATCAATT

Flanking Amino Acid:

MARISSLPEGKPLNENEKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.2

0.22

1.3

61.6

41.7

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

72.3

0.5

43.9

Minor 5ss

26.9

-2.7

4.4

38.6

46.6

Minor BPS

49.3

0.03

1.8

67.39

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022485

98731323 - 98738926

7604