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Intron Name: Anas_platyrhynchos_platyrhynchos_3_98741397_98741962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

98741397 - 98741962

Intron Length:

566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

CTTCTTTTAAAG

Flanking Amino Acid:

EKMKAELWSQAEMHKEDAVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

82.6

24.7

Major BPS

70.1

0.5

70.3

31.9

Major PPT

74.3

0.55

74.6

33.4

Minor 5ss

38.9

-1.3

2.9

47.2

Minor BPS

58.1

0.12

1.5

61.29

40.8

Associated Gene:

Gene:

C6orf163

Ensembl Gene ID:

ENSAPLG00000028957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021643

98738262 - 98745586

7325