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Intron Name: Anas_platyrhynchos_platyrhynchos_3_98775257_98776283_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
98775257 - 98776283

Intron Length:
1027

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACACATC

5'SS Class:
major

3'SS Sequence:
TTCCTCTATCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CATTAAT

U12 Branch Point Sequence:
TTTTCCTCTATC

Flanking Amino Acid:
HFEYLAPYTQTRSADKSLMK

Intron Amino Acid Position:
551

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.6
0.53
1.1
69.7
41.2

Major BPS
79.4
0.73
0.9
79.6
29.1

Major PPT
80.6
0.69
0.8
73.4
36.2

Minor 5ss
42.2
-0.9
3.2
60.3
44.4

Minor BPS
64.3
0.43
1.9
79.1
36.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

98762547 - 98776719
14173