Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_98846629_98847125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

98846629 - 98847125

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGCCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATGC

Flanking Amino Acid:

ENIRRLPSFRRYVENQTSEK

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.7

0.49

0.9

62.2

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

0.07

1.9

66.44

39.7

Associated Gene:

Gene:

ORC3

Ensembl Gene ID:

ENSAPLG00000010933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048083

98836564 - 98864665

28102

ENSAPLT00000011453

98836564 - 98864718

28155