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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99005493_99005971_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

99005493 - 99005971

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGCATATGGATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

YVWKIIAPNKTAHILPNDSA

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.09

1.1

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

SPACA1

Ensembl Gene ID:

ENSAPLG00000026124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026472

98997817 - 99017037

19221

ENSAPLT00000018204

98997817 - 99020384

22568