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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99006108_99012470_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99006108 - 99012470

Intron Length:

6363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TAATAATGACCT

Flanking Amino Acid:

SVKYTVHATTEHQTKQSERI

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

41.7

Major BPS

0.75

78.6

Major PPT

1.06

0.5

96.7

11.4

Minor 5ss

44.3

-0.6

2.8

53.9

44.3

Minor BPS

44.8

-0.3

2.1

65.88

43.5

Associated Gene:

Gene:

SPACA1

Ensembl Gene ID:

ENSAPLG00000026124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026472

98997817 - 99017037

19221

ENSAPLT00000018204

98997817 - 99020384

22568