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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99012616_99012888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99012616 - 99012888

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

TTTTCCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTGTTTAATT

Flanking Amino Acid:

IFAIIFVILHWAIVKAVLGS

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

65.1

41.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

88.3

0.86

0.7

86.1

26.6

Minor 5ss

30.8

-2.2

3.4

37.1

42.6

Minor BPS

74.8

0.86

1.7

91.31

32.6

Associated Gene:

Gene:

SPACA1

Ensembl Gene ID:

ENSAPLG00000026124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026472

98997817 - 99017037

19221

ENSAPLT00000018204

98997817 - 99020384

22568