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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99182179_99184713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99182179 - 99184713

Intron Length:

2535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

GGGTCGGTAACT

Flanking Amino Acid:

SFPNAYSTAMAVCNSIQNPV

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.1

38.4

Major BPS

60.7

0.27

65.3

28.1

Major PPT

80.5

0.69

0.8

72.9

37.4

Minor 5ss

29.2

-2.4

2.5

36.7

Minor BPS

46.8

-0.1

2.6

69.25

47.2

Associated Gene:

Gene:

RNGTT

Ensembl Gene ID:

ENSAPLG00000014978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015675

99182015 - 99364941

182927