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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99211030_99238791_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99211030 - 99238791

Intron Length:

27762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCCATTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

GATATCTTAAAA

Flanking Amino Acid:

RLKITRIGGEGLLTQNVGLL

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

79.7

35.4

Major BPS

77.8

0.69

78.2

31.8

Major PPT

81.4

0.71

0.8

80.3

31.6

Minor 5ss

-0.8

2.6

51.2

45.5

Minor BPS

62.5

0.39

1.4

67.58

37.9

Associated Gene:

Gene:

RNGTT

Ensembl Gene ID:

ENSAPLG00000014978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015675

99182015 - 99364941

182927