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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99267714_99287251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99267714 - 99287251

Intron Length:

19538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

TATGGAAAAAAA

Flanking Amino Acid:

PFFDIYASRKLLEGSFAREV

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.1

40.4

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

88.7

0.87

0.6

84.5

23.3

Minor 5ss

46.8

-0.3

2.9

64.1

47.4

Minor BPS

34.8

-1.1

2.3

47.88

41.7

Associated Gene:

Gene:

RNGTT

Ensembl Gene ID:

ENSAPLG00000014978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015675

99182015 - 99364941

182927