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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99287417_99301147_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99287417 - 99301147

Intron Length:

13731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTAACTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTGTAACT

Flanking Amino Acid:

YLIYDIIKFNGQPVGDCDFN

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.2

0.39

1.1

43.9

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

64.6

0.54

85.39

35.1

Associated Gene:

Gene:

RNGTT

Ensembl Gene ID:

ENSAPLG00000014978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015675

99182015 - 99364941

182927