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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99301220_99309366_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99301220 - 99309366

Intron Length:

8147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGAGC

5'SS Class:

major

3'SS Sequence:

TTGTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TAAACCTAAATG

Flanking Amino Acid:

THLTNTLLDGEMIIDKVNGQ

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

67.8

43.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

81.9

0.72

0.9

81.2

36.5

Minor 5ss

32.2

-2

3.1

34.8

41.4

Minor BPS

54.1

-0

1.8

58.34

43.2

Associated Gene:

Gene:

RNGTT

Ensembl Gene ID:

ENSAPLG00000014978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015675

99182015 - 99364941

182927