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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99309503_99330887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99309503 - 99330887

Intron Length:

21385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GCATCTTTAACA

Flanking Amino Acid:

YKVSWKADGTRYMMLVDGKN

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.9

38.6

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

77.5

0.62

0.9

70.5

39.9

Minor 5ss

44.6

-0.6

2.8

57.8

46.4

Minor BPS

74.1

0.75

1.2

72.84

Associated Gene:

Gene:

RNGTT

Ensembl Gene ID:

ENSAPLG00000014978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015675

99182015 - 99364941

182927