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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99345986_99349828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99345986 - 99349828

Intron Length:

3843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTGACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTGACA

Flanking Amino Acid:

CAFLVEKMDWSIEAAVATFA

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.6

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.9

0.74

80.1

37.1

Minor 5ss

37.5

-1.4

3.2

47.2

Minor BPS

73.1

0.72

1.4

83.34

30.2

Associated Gene:

Gene:

RNGTT

Ensembl Gene ID:

ENSAPLG00000014978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015675

99182015 - 99364941

182927