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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99349905_99353654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99349905 - 99353654

Intron Length:

3750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

TACTTCAAAATG

Flanking Amino Acid:

FSDKNPSELIGVHCTHGFNR

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

83.5

35.1

Major BPS

68.1

0.45

73.5

28.6

Major PPT

76.9

0.61

0.9

73.1

37.4

Minor 5ss

46.2

-0.4

2.8

67.2

43.9

Minor BPS

46.4

-0.4

1.9

52.53

42.7

Associated Gene:

Gene:

RNGTT

Ensembl Gene ID:

ENSAPLG00000014978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015675

99182015 - 99364941

182927