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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99411267_99414787_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99411267 - 99414787

Intron Length:

3521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

TTTTATTTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATGCCTTTTATT

Flanking Amino Acid:

AAYLPDVAEHDVTVKYYGKA

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

62.1

38.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

83.4

0.75

0.7

77.4

36.6

Minor 5ss

27.9

-2.5

27.6

37.5

Minor BPS

56.3

0.28

1.6

71.26

40.4

Associated Gene:

Gene:

PM20D2

Ensembl Gene ID:

ENSAPLG00000015721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046439

99410607 - 99423366

12760

ENSAPLT00000016382

99410607 - 99424386

13780