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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99414931_99417953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99414931 - 99417953

Intron Length:

3023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGACCT

5'SS Class:

major

3'SS Sequence:

TCTCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

ACACTGTTAACA

Flanking Amino Acid:

QQMKPTWRVHGVIKNGGVKP

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

0.9

66.9

38.2

Major BPS

0.52

1.1

77.7

35.3

Major PPT

88.6

0.87

0.6

84.3

23.6

Minor 5ss

29.3

-2.4

3.1

37.8

40.6

Minor BPS

49.3

-0

59.53

40.2

Associated Gene:

Gene:

PM20D2

Ensembl Gene ID:

ENSAPLG00000015721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046439

99410607 - 99423366

12760

ENSAPLT00000016382

99410607 - 99424386

13780