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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99419456_99421117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99419456 - 99421117

Intron Length:

1662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGGTTTTCAATG

Flanking Amino Acid:

SEDSILNGLSGYQVLLLKGK

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.1

38.3

Major BPS

100

1.24

0.5

100

Major PPT

86.6

0.82

0.7

85.5

29.2

Minor 5ss

39.1

-1.2

2.9

49.8

46.4

Minor BPS

51.9

-0

1.6

55.4

40.8

Associated Gene:

Gene:

PM20D2

Ensembl Gene ID:

ENSAPLG00000015721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046439

99410607 - 99423366

12760