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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99419456_99423258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99419456 - 99423258

Intron Length:

3803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCAA

5'SS Class:

strong_major

3'SS Sequence:

ATGCTGCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGAATTTTAATG

Flanking Amino Acid:

SEDSILNGLSGSTDFGNVTF

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.1

38.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.4

0.41

0.9

58.9

42.4

Minor 5ss

39.1

-1.2

2.9

49.8

46.4

Minor BPS

53.1

-0

1.3

51.61

36.9

Associated Gene:

Gene:

PM20D2

Ensembl Gene ID:

ENSAPLG00000015721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016382

99410607 - 99424386

13780