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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99421254_99423258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

99421254 - 99423258

Intron Length:

2005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCGCTC

5'SS Class:

major

3'SS Sequence:

ATGCTGCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGAATTTTAATG

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.2

60.4

44.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.4

0.41

0.9

58.9

42.4

Minor 5ss

46.9

-0.3

3.1

67.7

43.5

Minor BPS

53.1

-0

1.3

51.61

36.9

Associated Gene:

Gene:

PM20D2

Ensembl Gene ID:

ENSAPLG00000015721

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046439

99410607 - 99423366

12760