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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99482775_99484279_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
99482775 - 99484279

Intron Length:
1505

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTACGTTGC

5'SS Class:
major

3'SS Sequence:
TTCTTTCCCTAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACTACAT

U12 Branch Point Sequence:
AAAACCACACTA

Flanking Amino Acid:
SQTCSLELESYAYTDEDLML

Intron Amino Acid Position:
199

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.1
0.33
1.2
57.6
42.5

Major BPS
61.4
0.28
1.1
69
36.5

Major PPT
74.2
0.55
0.9
79.5
26.5

Minor 5ss
42.4
-0.8
3.1
61.7
43.1

Minor BPS
40.2
-0.7
1.9
46.39
36.2

Associated Gene:

Gene:
GABRR2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

99477791 - 99501172
23382