Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_99486710_99489317_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99486710 - 99489317

Intron Length:

2608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TTTTTCCTGAAG

Flanking Amino Acid:

SLDSISEVDMDFTMTLYLRH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

79.9

34.9

Major BPS

69.1

0.47

60.7

37.6

Major PPT

78.1

0.63

79.7

26.3

Minor 5ss

36.5

-1.5

47.5

43.4

Minor BPS

54.5

-0

1.9

68.2

39.1

Associated Gene:

Gene:

GABRR2

Ensembl Gene ID:

ENSAPLG00000015752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016415

99477791 - 99501172

23382