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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99647507_99649871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99647507 - 99649871

Intron Length:

2365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACAC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TGTTTCTCTAAG

Flanking Amino Acid:

AGANVLAKNKAGNTPLHLAC

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

71.2

34.5

Major BPS

82.1

0.8

71.6

36.4

Major PPT

67.8

0.4

1.1

71.8

38.4

Minor 5ss

26.8

-2.7

2.9

32.6

42.4

Minor BPS

46.9

-0.3

57.44

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016201

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016907

99631454 - 99656946

25493