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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99649971_99650909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99649971 - 99650909

Intron Length:

939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGACAT

U12 Branch Point Sequence:

ACTGCAATGACA

Flanking Amino Acid:

GGSRADLKNNAGDTCLHVAA

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

76.9

34.5

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

89.1

0.88

0.7

84.2

30.7

Minor 5ss

40.8

-1

53.8

43.6

Minor BPS

46.3

-0.3

58.81

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016201

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016907

99631454 - 99656946

25493