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Intron Name: Anas_platyrhynchos_platyrhynchos_3_99683296_99684258_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

99683296 - 99684258

Intron Length:

963

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ACCAACAATTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TCTGTTGTAACT

Flanking Amino Acid:

VSDKIESEDQIEDSFQKDKE

Intron Amino Acid Position:

4673

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.6

1.15

0.7

90.9

28.7

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

57.8

0.18

52.1

40.9

Minor 5ss

35.8

-1.6

4.1

57.8

46.8

Minor BPS

52.3

0.15

2.1

74.22

43.6

Associated Gene:

Gene:

MDN1

Ensembl Gene ID:

ENSAPLG00000000987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001146

99667299 - 99757983

90685